4.53. multiqc_only

Combine multiple FastQC reports into a single MultiQC summary.

4.53.1. Inputs

4.53.1.1. Required inputs

multiqc_only.input_files
Array[File] — Default: None
???

4.53.1.2. Other inputs

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multiqc_only.file_name
String — Default: "multiqc-raw.html"
???

multiqc_only.MultiQC.comment
String? — Default: None
???

multiqc_only.MultiQC.config
File? — Default: None
???

multiqc_only.MultiQC.config_yaml
String? — Default: None
???

multiqc_only.MultiQC.data_dir
Boolean — Default: false
???

multiqc_only.MultiQC.docker
String — Default: "quay.io/biocontainers/multiqc:1.8--py_2"
???

multiqc_only.MultiQC.exclude_modules
Array[String]? — Default: None
???

multiqc_only.MultiQC.export
Boolean — Default: false
???

multiqc_only.MultiQC.flat
Boolean — Default: false
???

multiqc_only.MultiQC.force
Boolean — Default: false
???

multiqc_only.MultiQC.full_names
Boolean — Default: false
???

multiqc_only.MultiQC.ignore_analysis_files
String? — Default: None
???

multiqc_only.MultiQC.ignore_sample_names
String? — Default: None
???

multiqc_only.MultiQC.interactive
Boolean — Default: true
???

multiqc_only.MultiQC.lint
Boolean — Default: false
???

multiqc_only.MultiQC.megaQC_upload
Boolean — Default: false
???

multiqc_only.MultiQC.module_to_use
Array[String]? — Default: None
???

multiqc_only.MultiQC.no_data_dir
Boolean — Default: false
???

multiqc_only.MultiQC.out_dir
String — Default: "./multiqc-output"
???

multiqc_only.MultiQC.output_data_format
String? — Default: None
[tsv|yaml|json] default:tsv

multiqc_only.MultiQC.pdf
Boolean — Default: false
???

multiqc_only.MultiQC.sample_names
File? — Default: None
???

multiqc_only.MultiQC.tag
String? — Default: None
???

multiqc_only.MultiQC.template
String? — Default: None
???

multiqc_only.MultiQC.title
String? — Default: None
???

multiqc_only.MultiQC.zip_data_dir
Boolean — Default: false
???

4.53.2. Outputs

multiqc_only.multiqc
File
???

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