4.16. classify_kaiju¶
Taxonomic classification of reads with kaiju.
4.16.1. Inputs¶
4.16.1.1. Required inputs¶
classify_kaiju.kaiju.kaiju_db_lz4
File — Default: None
???
classify_kaiju.kaiju.krona_taxonomy_db_tgz
File — Default: None
???
classify_kaiju.kaiju.ncbi_taxonomy_db_tgz
File — Default: None
???
classify_kaiju.kaiju.reads_unmapped_bam
File — Default: None
???
4.16.1.2. Other inputs¶
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classify_kaiju.kaiju.docker
String — Default: "quay.io/broadinstitute/viral-classify:2.1.33.0"
???
classify_kaiju.kaiju.machine_mem_gb
Int? — Default: None
???
4.16.2. Outputs¶
classify_kaiju.kaiju_reads
File
???
classify_kaiju.kaiju_report
File
???
classify_kaiju.krona_report_html
File
???
classify_kaiju.viral_classify_version
String
???
Generated using WDL AID (1.0.0)