4.34. merge_vcfs¶
4.34.1. Inputs¶
4.34.1.1. Required inputs¶
merge_vcfs.merge_vcfs_gatk.in_vcfs_gz
Array[File] — Default: None
VCF files to merged; should be (b)gzipped.
merge_vcfs.merge_vcfs_gatk.ref_fasta
File — Default: None
fasta file of reference genome relative to which the input VCF sites were called
4.34.1.2. Other inputs¶
Show/Hide
merge_vcfs.merge_vcfs_gatk.docker
String — Default: "quay.io/broadinstitute/viral-phylo"
???
merge_vcfs.merge_vcfs_gatk.machine_mem_gb
Int? — Default: None
???
merge_vcfs.merge_vcfs_gatk.output_prefix
String — Default: "merged"
???
Generated using WDL AID (0.1.1)