4.27. isnvs_one_sample¶
4.27.1. Inputs¶
4.27.1.1. Required inputs¶
isnvs_one_sample.isnvs_per_sample.assembly_fasta
File — Default: None
???
isnvs_one_sample.isnvs_per_sample.mapped_bam
File — Default: None
???
4.27.1.2. Other inputs¶
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isnvs_one_sample.isnvs_per_sample.docker
String — Default: "quay.io/broadinstitute/viral-phylo"
???
isnvs_one_sample.isnvs_per_sample.machine_mem_gb
Int? — Default: None
???
isnvs_one_sample.isnvs_per_sample.maxBias
Int? — Default: None
???
isnvs_one_sample.isnvs_per_sample.minReadsPerStrand
Int? — Default: None
???
isnvs_one_sample.isnvs_per_sample.sample_name
String — Default: basename(basename(basename(mapped_bam,".bam"),".all"),".mapped")
???
isnvs_one_sample.isnvs_per_sample.threads
Int? — Default: None
???
Generated using WDL AID (0.1.1)