4.56. merge_bams

Merge, reheader, or merge-and-reheader BAM files.

4.56.1. Inputs

4.56.1.1. Required inputs

merge_bams.merge_and_reheader_bams.in_bams
Array[File]+ — Default: None
???

4.56.1.2. Other inputs

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merge_bams.merge_and_reheader_bams.disk_size
Int — Default: 750
???

merge_bams.merge_and_reheader_bams.docker
String — Default: "quay.io/broadinstitute/viral-core:2.5.21"
???

merge_bams.merge_and_reheader_bams.machine_mem_gb
Int — Default: 8
???

merge_bams.merge_and_reheader_bams.out_basename
String — Default: basename(in_bams[0],".bam")
???

merge_bams.merge_and_reheader_bams.reheader_table
File? — Default: None
???

merge_bams.merge_and_reheader_bams.sample_name
String? — Default: None
???

4.56.2. Outputs

merge_bams.out_bam
File
???

merge_bams.viral_core_version
String
???

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