# mafft MAFFT multiple-alignment for a set of possibly multi-segment genomes. ## Inputs ### Required inputs
mafft.multi_align_mafft.assemblies_fasta
Array[File]+ — Default: None
???
mafft.multi_align_mafft.docker
String — Default: "quay.io/broadinstitute/viral-phylo:2.1.20.2"
???
mafft.multi_align_mafft.machine_mem_gb
Int? — Default: None
???
mafft.multi_align_mafft.mafft_ep
Float? — Default: None
???
mafft.multi_align_mafft.mafft_gapOpeningPenalty
Float? — Default: None
???
mafft.multi_align_mafft.mafft_maxIters
Int? — Default: None
???
mafft.multi_align_mafft.out_prefix
String — Default: "aligned"
???
mafft.alignments_by_chr
Array[File]
???
mafft.sampleNamesFile
File
???
mafft.viral_phylo_version
String
???