# fetch_sra_to_bam
Retrieve reads from the NCBI Short Read Archive in unaligned BAM format with relevant metadata encoded.

## Inputs

### Required inputs
<p name="fetch_sra_to_bam.Fetch_SRA_to_BAM.SRA_ID">
        <b>fetch_sra_to_bam.Fetch_SRA_to_BAM.SRA_ID</b><br />
        <i>String &mdash; Default: None</i><br />
        ???
</p>

### Other inputs
<details>
<summary> Show/Hide </summary>
<p name="fetch_sra_to_bam.Fetch_SRA_to_BAM.docker">
        <b>fetch_sra_to_bam.Fetch_SRA_to_BAM.docker</b><br />
        <i>String &mdash; Default: "quay.io/broadinstitute/ncbi-tools:2.10.7.10"</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.Fetch_SRA_to_BAM.machine_mem_gb">
        <b>fetch_sra_to_bam.Fetch_SRA_to_BAM.machine_mem_gb</b><br />
        <i>Int? &mdash; Default: None</i><br />
        ???
</p>
</details>

## Outputs
<p name="fetch_sra_to_bam.biosample_accession">
        <b>fetch_sra_to_bam.biosample_accession</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.library_id">
        <b>fetch_sra_to_bam.library_id</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.reads_ubam">
        <b>fetch_sra_to_bam.reads_ubam</b><br />
        <i>File</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.run_date">
        <b>fetch_sra_to_bam.run_date</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sample_collected_by">
        <b>fetch_sra_to_bam.sample_collected_by</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sample_collection_date">
        <b>fetch_sra_to_bam.sample_collection_date</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sample_geo_loc">
        <b>fetch_sra_to_bam.sample_geo_loc</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sample_strain">
        <b>fetch_sra_to_bam.sample_strain</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sequencing_center">
        <b>fetch_sra_to_bam.sequencing_center</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sequencing_platform">
        <b>fetch_sra_to_bam.sequencing_platform</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sequencing_platform_model">
        <b>fetch_sra_to_bam.sequencing_platform_model</b><br />
        <i>String</i><br />
        ???
</p>
<p name="fetch_sra_to_bam.sra_metadata">
        <b>fetch_sra_to_bam.sra_metadata</b><br />
        <i>File</i><br />
        ???
</p>

<hr />

> Generated using WDL AID (1.0.0)