# CreateEntericsQCViz


## Inputs

### Required inputs
<p name="CreateEntericsQCViz.create_viz.assembly_length">
        <b>CreateEntericsQCViz.create_viz.assembly_length</b><br />
        <i>Array[String] &mdash; Default: None</i><br />
        assembly length metrics for selected samples
</p>
<p name="CreateEntericsQCViz.create_viz.est_coverage_clean">
        <b>CreateEntericsQCViz.create_viz.est_coverage_clean</b><br />
        <i>Array[String] &mdash; Default: None</i><br />
        estimated coverage metrics for selected samples
</p>
<p name="CreateEntericsQCViz.create_viz.gambit_predicted_taxon">
        <b>CreateEntericsQCViz.create_viz.gambit_predicted_taxon</b><br />
        <i>Array[String] &mdash; Default: None</i><br />
        predicted gambits for selected samples
</p>
<p name="CreateEntericsQCViz.create_viz.number_contigs">
        <b>CreateEntericsQCViz.create_viz.number_contigs</b><br />
        <i>Array[String] &mdash; Default: None</i><br />
        number contigs metrics for selected samples
</p>
<p name="CreateEntericsQCViz.create_viz.sample_ids">
        <b>CreateEntericsQCViz.create_viz.sample_ids</b><br />
        <i>Array[String] &mdash; Default: None</i><br />
        selected samples of data
</p>

### Other inputs
<details>
<summary> Show/Hide </summary>
<p name="CreateEntericsQCViz.create_viz.docker">
        <b>CreateEntericsQCViz.create_viz.docker</b><br />
        <i>String &mdash; Default: "us-central1-docker.pkg.dev/pgs-automation/enterics-visualizations/create_visualization_html:v6"</i><br />
        ???
</p>
<p name="CreateEntericsQCViz.create_viz.output_filename">
        <b>CreateEntericsQCViz.create_viz.output_filename</b><br />
        <i>String &mdash; Default: "QC_visualizations.html"</i><br />
        name of output file containing visualizations
</p>
<p name="CreateEntericsQCViz.create_viz.thresholds_file">
        <b>CreateEntericsQCViz.create_viz.thresholds_file</b><br />
        <i>File? &mdash; Default: None</i><br />
        JSON file containing custom thresholds
</p>
</details>

## Outputs
<p name="CreateEntericsQCViz.visualization_html">
        <b>CreateEntericsQCViz.visualization_html</b><br />
        <i>File</i><br />
        ???
</p>

<hr />

> Generated using WDL AID (1.0.0)